Monday, June 8, 2009

Light harvesting in plants



24 highly-cited papers from 2003 to 2009 form a "research front" on light harvesting in plants, as reported at
Sciencewatch.com.

Topics covered include:
  • Carotenoid and regulation of light harvesting
  • Chloroplast protein kinase
  • Light stress
  • Organization of thylakoid proteins
  • Photo-inhibition
  • Photo-protection
  • Photosystem I - crystal structure
  • Photosystem II - core phosphorylation
  • Photosystem II - light-harvesting antenna
  • Photosystem II - repair
  • Plant antenna protein
  • Proteases in chloroplasts
  • Quenching
Papers in the research front:

Title: Crystal structure of spinach major light-harvesting complex at 2.72 angstrom resolution
Journal: NATURE, 428 (6980): 287-292 MAR 18 2004
Authors: Liu, ZF; Yan, HC; Wang, KB; Kuang, TY; Zhang, JP; Gui, LL; An, XM; Chang, WR


Title: Crystal structure of plant photosystem I
Journal: NATURE, 426 (6967): 630-635 DEC 11 2003
Authors: Ben-Shem, A; Frolow, F; Nelson, N

Title: Carotenoid cation formation and the regulation of photosynthetic light harvesting
Journal: SCIENCE, 307 (5708): 433-436 JAN 21 2005
Authors: Holt, NE; Zigmantas, D; Valkunas, L; Li, XP; Niyogi, KK; Fleming, GR

Title: Supramolecular organization of thylakoid membrane proteins in green plants
Journal: BBA BIOENERGETICS, 1706 (1-2): 12-39 JAN 7 2005
Authors: Dekker, JP; Boekema, EJ

Title: Rote of chloroplast protein kinase Stt7 in LHCII phosphorylation and state transition in Chlamydomonas
Journal: SCIENCE, 299 (5612): 1572-1575 MAR 7 2003
Authors: Depege, N; Bellafiore, S; Rochaix, JD

Title: Molecular basis of photoprotection and control of photosynthetic light-harvesting
Journal: NATURE, 436 (7047): 134-137 JUL 7 2005
Authors: Pascal, AA; Liu, ZF; Broess, K; van Oort, B; van Amerongen, H; Wang, C; Horton, P; Robert, B; Chang, WR; Ruban, A

Title: Evidence for direct carotenoid involvement in the regulation of photosynthetic light harvesting
Journal: PROCEEDINGS OF THE NATIONAL ACADEMIES OF SCIENCE OF THE USA, 100 (8): 4377-4382 APR 15 2003
Authors: Ma, YZ; Holt, NE; Li, XP; Niyogi, KK; Fleming, GR

Title: Photoinhibition - a historical perspective
Journal: PHOTOSYNTHESIS RESEARCH, 76 (1-3): 343-370 2003
Authors: Adir, N; Zer, H; Shochat, S; Ohad, I


Title: Is PsbS the site of non-photochemical quenching in photosynthesis?
Journal: JOURNAL OF EXPERIMENTAL BOTANY, 56 (411): 375-382 JAN 2005
Authors: Niyogi, KK; Li, XP; Rosenberg, V; Jung, HS


Title: Coordinated regulation and complex formation of YELLOW VARIEGATED1 and YELLOW VARIEGATED2, chloroplastic FtsH metalloproteases involved in the repair cycle of photosystem II in Arabidopsis thylakoid membranes Journal: PLANT CELL, 15 (12): 2843-2855 DEC 2003
Authors: Sakamoto, W; Zaltsman, A; Adam, Z; Takahashi, Y

Title: Molecular design of the photosystem II light-harvesting antenna: photosynthesis and photoprotection Journal:
JOURNAL OF EXPERIMENTAL BOTANY, 56 (411): 365-373 JAN 2005
Authors: Horton, P; Ruban, A

Title: Dynamics of photosystem II: a proteomic approach to thylakoid protein complexes
Journal:
JOURNAL OF EXPERIMENTAL BOTANY, 56 (411): 347-356 JAN 2005
Authors: Aro, EM; Suorsa, M; Rokka, A; Allahverdiyeva, Y; Paakkarinen, V; Saleem, A; Battchikova, N; Rintamaki, E

Title: Photosystem II core phosphorylation and photosynthetic acclimation require two different protein kinases Journal: NATURE, 437 (7062): 1179-1182 OCT 20 2005
Authors: Bonardi, V; Pesaresi, P; Becker, T; Schleiff, E; Wagner, R; Pfannschmidt, T; Jahns, P; Leister, D

Title: FtsH-mediated repair of the photosystem II complex in response to light stress
Journal:
JOURNAL OF EXPERIMENTAL BOTANY, 56 (411): 357-363 JAN 2005
Authors: Nixon, PJ; Barker, M; Boehm, M; de Vries, R; Komenda, J

Title: Protein degradation machineries in plastids
Journal: ANNUAL REVIEW OF PLANT BIOLOGY, 57: 599-621 2006
Authors: Sakamoto, W

Title: Photoprotection in an ecological context: the remarkable complexity of thermal energy dissipation
Journal: NEW PHYTOLOGIST, 172 (1): 11-21 2006
Authors: Demmig-Adams, B; Adams, WW

Title: Recent advances in the study of Clp, FtsH and other proteases located in chloroplasts
Journal: CURRENT OPINION IN PLANT BIOLOGY, 9 (3): 234-240 JUN 2006
Authors: Adam, Z; Rudella, A; van Wijk, KJ

Title: Identification of a mechanism of photoprotective energy dissipation in higher plants
Journal: NATURE, 450 (7169): 575-U22 NOV 22 2007
Authors: Ruban, AV; Berera, R; Ilioaia, C; van Stokkum, IHM; Kennis, JTM; Pascal, AA; van Amerongen, H; Robert, B; Horton, P; van Grondelle, R

Title: Lack of the light-harvesting complex CP24 affects the structure and function of the grana membranes of higher plant chloroplasts
Journal: PLANT CELL, 18 (11): 3106-3120 NOV 2006
Authors: Kovacs, L; Damkjaer, J;Kereiche, S; Ilioaia, C; Ruban, AV; Boekema, EJ; Jansson, S;Horton, P

Title: Psb27, a cyanobacterial lipoprotein, is involved in the repair cycle of photosystem II
Journal: PLANT CELL, 18 (11): 3121-3131 NOV 2006
Authors: Nowaczyk, MM; Hebeler, R; Schlodder, E; Meyer, HE; Warscheid, B; Rogner, M

Title: Architecture of a charge-transfer state regulating light harvesting in a plant antenna protein
Journal: SCIENCE, 320 (5877): 794-797 MAY 9 2008
Authors: Ahn, TK; Avenson, TJ; Ballottari, M; Cheng, YC; Niyogi, KK; Bassi, R; Fleming, GR

Title: Zeaxanthin radical cation formation in minor light-harvesting complexes of higher plant antenna
Journal: JOURNAL OF BIOLOGICAL CHEMISTRY, 283 (6): 3550-3558 FEB 8 2008
Authors: Avenson, TJ; Ahn, TK; Zigmantas, D; Niyogi, KK; Li, Z; Ballottari, M; Bassi, R; Fleming, GR

Title: Interorganellar communication
Journal:
CURRENT OPINION IN PLANT BIOLOGY, 10 (6): 600-606 DEC 2007
Authors: Pesaresi, P; Schneider, A; Kleine, T; Leister, D

Title: How do environmental stresses accelerate photoinhibition?
Journal: TRENDS IN PLANT SCIENCE, 13 (4): 178-182 APR 2008
Authors: Takahashi, S; Murata, N

Tuesday, May 26, 2009

Recent publications from UW-Madison researchers


Recent publications by researchers affiliated with the departments of Agronomy, Entomology, Horticulture, and Plant Pathology at the University of Wisconsin - Madison:

Monday, May 18, 2009

Gypsy moths in Wisconsin



The gypsy moth caterpillar (Lymantria dispar, formerly Porthetria dispar) is known for defoliating over 200 species of trees, as well as plants.

In Wisconsin, the Department of Natural Resources (DNR) manages the gypsy moth population with quarantines and insecticides, including aerial spraying of the bacteria Bacillus thuringiensis var. kurstaki (Btk).

Books, Dissertations, & Government documents (selected):

Gypsy moth websites:


[Image: Wisconsin DNR]

Thursday, May 7, 2009

"In Defense of Food" picked for Go Big Read



Madison area residents are invited to participate in the "Go Big Read" common book project this upcoming Fall.

The first book picked is "In Defense of Food: An Eater's Manifesto" by Michael Pollan, who is scheduled to visit campus September 24-26.

Books by Michael Pollan:
Related books:

Sustainable Energy & Development e-books



UW-Madison Libraries have added access to the "Sustainable Energy & Development" collection of e-books through our Knovel subscription.
Titles of interest include:
  • Biofuels Refining and Performance (2008)
  • Biodiesel Handbook (2005)
  • Biomass Assessment Handbook - Bioenergy for a Sustainable Environment (2007)
  • Biomass for Renewable Energy, Fuels, and Chemicals (1998)
  • Bioprocessing for Value-Added Products from Renewable Resources - New Technologies and Applications (2007)
  • Biotechnology for Fuels and Chemicals - The Twenty-Eighth Symposium (2007)
  • Dictionary of Energy (2006)
  • Encyclopedia of Energy, Volumes 1 - 6 (2004)
  • Energy Harvesting Materials (2005)
  • Environmentally Conscious Alternative Energy Production (2007)
  • Food System - A Guide (2009)
  • Future Energy - Improved, Sustainable and Clean Options for Our Planet (2008)
  • Handbook of Organic Food Processing and Production (2nd Edition) (2000)
  • Monitoring and Predicting Agricultural Drought - A Global Study (2005)
  • Pesticide Detox - Towards a More Sustainable Agriculture (2005)
  • Pesticide Residues in Food and Drinking Water - Human Exposure and Risks (2004)
  • Pesticide, Veterinary and other Residues in Food (2004)
  • Renewable Bioenergy - Technologies, Risks, and Rewards (2003)
  • Renewables-Based Technology - Sustainability Assessment (2007)
  • Sustainability and Environmental Impact of Renewable Energy Sources (2003)
  • Sustainability in Agriculture (2005)
  • Tropical Soils - Properties and Management for Sustainable Agriculture (2003)
  • Water Encyclopedia, Volumes 1-5 (2005)

Tuesday, May 5, 2009

NEW! Full text articles in CAB Abstracts




The UW-Madison Libraries have activated access to over 45,000 full text articles via CAB Abstracts.

These come from about 250 journals and about 400 conference proceedings & reports - around 12,000 new articles will be added per year. See this Powerpoint from CABI to learn how to limit a search to full text.

Conferences & reports include:
  • Annual Conference of the Plant Growth Regulation Society of America

  • Annual Meeting of the Interamerican Society for Tropical Horticulture

  • Arab Conference for Applied Biological Pest Control

  • Australian weeds conference

  • Congress of the Entomological Society of Southern Africa

  • European Association for Potato Research (EAPR) Virology Section Meeting

  • European Weed Research Society Symposium

  • International Bacterial Wilt Symposium

  • International Safflower Conference

  • International Symposium on Biological Control of Arthropods

  • International Symposium on Biological Control of Bacterial Plant Diseases

  • International Symposium on Fruit Flies of Economic Importance

  • International Symposium on New Crops and Uses

  • International Symposium on the Biosafety of Genetically Modified Organisms

  • New Zealand Plant Protection Conference

  • Report of a Working Group on Solanaceae

  • Report on a Working Group on Curcubits

  • Sustainable Grassland Productivity
Journals include:
  • Acta Scientiarum - Agronomy (2003+)

  • Agronomia Mesoamericana (2005+)

  • Agronomijas Vestis / Latvian Journal of Agronomy

  • Agro-Science (2005+)

  • Anais do Instituto Superior de Agronomia (1995+)

  • Annals of Medical Entomology (2003+)

  • Asian Journal of Horticulture (2007+)

  • Australian Journal of Crop Science (2008+)

  • Buletinul Universitatii de Stiinte Agricole si Medicina Veterinara Cluj-Napoca. Seria Horticultura (2007+)

  • Crop Breeding and Applied Biotechnology (2005+)

  • Current Nematology (2004+)

  • Folia Horticulturae (2005+)

  • Folia Parasitologica (2005+ with 6 month embargo)

  • Garcia de Orta - Serie de Botanica (2006+)

  • Garcia de Orta - Serie de Estudos Agronomicos

  • Haryana Journal of Horticultural Sciences (2006+)

  • Horticulture, Environment and Biotechnology (2006+)

  • Insect Environment (2008+)

  • International Journal of Sustainable Crop Production (2006+)

  • Iranian Journal of Plant Pathology (2006+)

  • Journal of Crop and Weed (2006+)

  • Journal of Horticultural Sciences (2006+)

  • Journal of Mycopathological Research (2005+)

  • Journal of Phytological Research (2005+)

  • Journal of Plant Biochemistry and Biotechnology (2005+)

  • Journal of Plant Biotechnology (2005+)

  • Journal of Plant Pathology (2005+ with 6 month embargo)

  • Journal of Plant Protection and Environment (2007+)

  • Journal of Soils and Crops (2005+)

  • Journal of Spices and Aromatic Crops (2005+)

  • Journal of the Korean Society for Horticultural Science (2005+)

  • Korean Journal of Crop Science (2005+)

  • Korean Journal of Horticultural Science & Technology (2005+)

  • Lucrari Stiintifice - Universitatea de Stiinte Agronomice Bucuresti. Seria B, Horticultura

  • National Journal of Plant Improvement (2005+)

  • Nematologia Brasileira (2005+)

  • New Zealand Plant Protection

  • Notulae Botanicae, Horti Agrobotanici Cluj-Napoca (2007+)

  • Pakistan Journal of Weed Science Research (2005+)

  • Philippine Journal of Crop Science (2005+)

  • Phytopathologia Polonica (2005+)

  • Plant Archives (2006+)

  • Plant Omics (2008+)

  • Plant Pathology Bulletin (2005+)

  • Plant Production Science (2005+)

  • Proceedings of the Interamerican Society for Tropical Horticulture (2004+)

  • Revista Brasileira de Horticultura Ornamental (2008+)

  • Revista de Ciencias Agroveterinarias / Journal of Agronomy and Veterinary Sciences (2002+)

  • Sodininkyste ir Darzininkyste / Horticulture and Vegetable Growing (2005+)

  • South Indian Horticulture

  • Soybean Genetics Newsletter (2005+)

  • Udyanika: A Journal of Horticultural Sciences

  • Vegetable Crops Research Bulletin (2005+)

Friday, May 1, 2009

Invasive species



Invasive plant and insect species have ecological, economic and health impacts. With changes in human geography and climate, management of biological invasions is of increasing concern.

Books:
Journals:

Dissertations & Theses:

Government Documents & Technical Reports:

Video:

See also:

Wednesday, April 29, 2009

DNA barcoding mosquitoes to fight disease



"DNA barcoding" will be used in Africa to help identify and track the mosquito species that spread the worm larvae causing lymphatic filariasis (LF), commonly known as elephantiasis. This may lead to a minimized and more accurately-targeted application of insecticides.

The technology was kicked into high gear with the publication of "Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species" in the Proceedings of the Royal Society of London (Biological Sciences) by P.D.N. Hebert, S. Ratnasingham and J.R. deWaard of the University of Guelph in 2003.

See also:

PubMed Central - free open access journals



PubMed Central is the free digital archive of biomedical and life sciences journals, from the U.S. National Institutes of Health.

Journals recently added to PMC include:

See also:

Monday, April 27, 2009

Victory gardens!

[Image: UWDCC]

Self-reliance is promoted by governments in hard economic times, especially during times of war when food may be rationed.

In the United States, citizens have been urged to grow "victory gardens" or "war gardens" at least as far back as World War I.

Here are some of the materials available to those interested in these self-help, do-it-yourself gardening movements:

Online digitized e-books:

Materials in UW-Madison Libraries